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GENETIS
GENETIS
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Tue Jan 19 19:00:30 2021
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<p>OSC managed to figure out our issue with running XF from an interactive job on Slurm. Previously, we were losing our connection to x11 forwarding. The solution is to use sinteractive instead of srun to obtain an interactive job. Here's the syntax:</p> <p>sinteractive -A PAS0654 -t <time> -N 1 -n 8 -p serial</p> <p>The -p serial flag denotes the type of partition to request. It's important to specify this, as otherwise it will default to the debug node, which has a limit of 1 hour.</p> <p> </p> <p>We're going to begin a new run. The title is Machtay_2021_1_15_NPOP50_Asym . It is using the latest version of the GA Ryan has been working on (Latest_GA_Asym.cpp). We're using 6% reproduciton, 72% crossover, and 22% mutation. We are using 80% roulette selection. This correlates to the three numbers passed into the GA being 3 36 8 (since we're using 50 individuals).</p>
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