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Message ID: 157     Entry time: Mon Jun 6 14:19:59 2022
Author: Alex M 
Subject: Important Runs (2) 

This is a duplicate post of a previous post from the end of 2020 where I listed the important runs with some of their details in a table (as below). I am extending this table to include the important runs that have been conducted since this post. This includes the run used for the paper as well as the curved run done earlier this year.

In order to access the data for these runs, you can find them by going to this directory: /fs/ess/PAS1960/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Run_Outputs

Some of these runs can also be accessed in the old project space directory, though they should all be contained in the above directory. Here's the path if interested: 

The runs are contained in directories available in the above path. Use caution when listing files in some of these directories--some contain many files (primarily the .uan files -- more recent runs are better organized), which means it may take a long time to list files/directories.

Name Description Symmetry NPOP Generations Roulette/Tourney/Rank Crossover Reproduction  Mutation Injection  Penalty Neutrinos  
Machtay_20200824_Real_Run

First real run with significant amounts of data after the summer improvements.______________________________________

 Symmetric 10 15 100% Roulette 100% 0% - 100% Yes 100k  
Machtay_20200827_Asym_Length_Run First asymmetric length run after summer improvements. Asymmetric length 10 17 100% Roulette 100% 0% - 100% Yes 100k  
Machtay_20200831_Asym_Length_and_Angle Asymmetric length and angle run after summer improvements. Asymmetric length and angle 10 42 100% Roulette 100% 0% - 100% Yes 150k  
Machtay_20200911_Symmetric Longer symmetric run with fewer neutrinos. Symmetric 10 35 100% Roulette 100% 0% - 100% Yes 30k  
Machtay_20200914_Asymmetric_50_Individuals Longer asymmetric run with fewer neutrinos. Asymmetric (all dimensions) 50 26 100% Roulette 100% 0% - 100% Yes 30k  
Machtay_20201016_Symmetric_Improved_GA First run using improvements to GA based on Ryan's paperclip/fast loop analysis. Symmetric 50 10 50/50/0 75% 10% - 15% Yes 30k  
Machtay_20201023_300K_Nus_50_Individuals Started with all identical individuals to demonstrate evolution; replaced penalty with hard cutoff. Increased Nus for higher fitness score precision. Asymmetric (all dimensions 50 25 50/50/0 75% 10% - 15% No 300k  
AraSim_Polarity_Fix_2021_03_19 Run used in the paper. In this run, we fixed an error that had been noticed by Brian and Jorge in AraSim. The error involved the polarity of the signals in Report.cc (hence the name of this run).  Asymmetric(all dimensions) 50 31 80/20/0 72% 6% - 22% No 300k  
2022_02_08_Rank_Test

This was the first long run done using a new gene for the curvature of the cones. We recast the side lengths to be described by the coefficients of a quadratic polynomial, rather than by the opening angle. This also used rank selection instead of roulette.

Additionally, mutation has been changed here so as to apply small perturbations to existing genes rather than regenerating those genes altogether. This only applies to individuals created by crossover. The mutation column indicates the probability of mutating a gene and the standard deviation of the gaussian that determines the change (in terms of % of the original value).

 Asymmetric, Quadratic 50 50 0/90/10 72% 6% 1%, 5% 22% No 300k  
2022_04_14_Identical_Asym_Lower_Min This run used the asymmetric GA to see if by lowering the minimum length (down to 10 cm instead of 37.5) the GA would try to run away to ever smaller lengths.  Asymmetric 50 6 2/8/0 72% 6% - 22% No 300k  

 

 

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