Installing IceMC:

I: Getting anitaBuildTool

Clone the anitaBuildTool repository (https://github.com/anitaNeutrino/anitaBuildTool) to your user.

• git clone https://github.com/anitaNeutrino/anitaBuildTool

II: Get the Anita.sh file onto your user.

 Either copy the file from /users/PAS1960/dylanwells1629/Anita.sh

• cp /users/PAS1960/dylanwells1629/Anita.sh ~

or create a new file Anita.sh with the following code

# .bashrc

# Source global definitions

if [ -f /etc/bashrc ]; then

. /etc/bashrc

fi

#this modules were originally loading in both the env.sh, and bashrc_anita.sh files. This was redundant so it was added here, and removed from the others.                                          

 module load gnu/7.3.0

module load gnu

module load mvapich2

module load fftw3

#module load python/3.6-conda5.2

module load cmake

PATH=$PATH:$HOME/.local/bin:$home/bin

export PATH

export CC=`which gcc`

export CXX=`which g++`

export FFTWDIR=/fs/project/PAS0654/shared_software/fftw3/gnu/6.3/mvapich2/2.2/3.3.5

export ANITA_SOURCE_DIR=~/anitaBuildTool/

export ANITA_UTIL_INSTALL_DIR=~/anitaBuildTool/

export ICEMC_SRC_DIR=~/anitaBuildTool/components/icemc/

export ICEMC_BUILD_DIR=~/anitaBuildTool/build/components/icemc/

export DYLD_LIBRARY_PATH=${ICEMC_SRC_DIR}:${ICEMC_BUILD_DIR}:${DYLD_LIBRARY_PATH}

export ROOTSYS=/fs/project/PAS0654/shared_software/anita/owens_pitzer/build/root

# User specific aliases and functions

#This env.sh is for running the BiconeEvolution GENETIS software. This should only be un-commented if you are running GENETIS software. When you do this, comment out env.sh.                      

#source ~/new_root_setup.sh

source /fs/project/PAS0654/shared_software/anita/owens_pitzer/build/root/bin/thisroot.sh

#source /cvmfs/ara.opensciencegrid.org/trunk/centos7/setup.sh

#module load python/3.6-conda5.2

#BiconeGENETIS directory shortcut SHARED                                                                                                                                                           

alias GE='cd ../../../fs/project/PAS0654/BiconeEvolutionOSC/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/'

#emacs Alias                                                                                                                                                                                       

alias emacs='emacs -nw'

#root alias                                                                                                                                                                                        

alias root='root -l'

#Alias                                                                                                                                                                                             

alias l="ls"

alias python='/cvmfs/ara.opensciencegrid.org/trunk/centos7/misc_build/bin/python3.9'

Then source the file

• source Anita.sh

Note: You will need access to PAS0654 for this step or you will get a permissions error.

III: Running the build tool.

Go into the anitaBuildTool directory

• cd anitaBuildTool

And run the building script

• ./buildAnita.sh

Note: There will be an error if you source files for running Ara in your .bashrc

Comment these out and restart your terminal before running the build. (remember to source Anita.sh before running the build tool. You could also source Anita.sh in your .bashrc)

Error if you source files for running Ara:

CMake Error at components/libRootFftwWrapper/cmake_install.cmake:238 (file):

  file INSTALL cannot copy file

  "/users/PAS1960/dylanwells1629/anitaBuildTool/components/libRootFftwWrapper/include/AnalyticSignal.h"

  to

  "/cvmfs/ara.opensciencegrid.org/v2.0.0/centos7/ara_build/include/AnalyticSignal.h":

  Read-only file system.

Call Stack (most recent call first):