 Fri Jun 2 00:21:36 2023, Ryan Debolt, Error test results 
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Attached is a plot containing bar graphs with error bars representing the average number of generations it took for the GA to achieve a chi-squared value
of 0.25 (roughly equated to a 0.8 out of a max 1.0 fitness score). Unlike the fitness scores used by the GA, these values do not have simulated error attached
to them and are therefore a better measure of how well the GA is optimizing. These results were obtained by running 10 tests in the test loop for each |
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Thu Jun 1 21:49:29 2023, Dylan Wells, Guide to Updating pueoSim
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How To Update PueoSim For GENETIS:
First, whoever updates pueoSim needs access to pueoBuilder, pueoSim, and niceMC on GitHub (ask Will for permissions). |
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Mon May 29 20:21:07 2023, Dylan Wells, Pueo Physics of Results Plots 7x
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The Physics of Results Plots have been added to the Pueo Loop. The current version of the plotter is built for pueoSim v1.0 and located in ${WorkingDir}/Antenna_Performance_Metric
(Hasn't been pulled into the loop directory yet).
The pueoSim v1.0 IceFinal files were missing information on the RF direction and information needed to see an amplitude spectrum. I asked Will, |
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Thu May 25 15:36:54 2023, Ryan Debolt, Byran Reynolds, preliminary error tests (PUEO) 8x
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Here are some preliminary results from testing the effect of error on growth in the GA. For this test, we start with a simulated error of 0.5 because
our true fitness score is bounded between 0.0 and 1.0. From here, we simulate doubling the number of neutrinos by reducing the error by root(2), then root(4),
and observed the growth on the fitness scores plots. We did these three tests with both 50 and 100 individuals (plots starting with 30 use 50 and starting |
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Mon May 22 20:34:59 2023, Amy, Things to do before starting new PUEO run from 5/22/23 meeting
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Here is a list of things we agreed to do before starting a new PUEO run. Feel free to add notes here as things are done and we will revisit the
list next week.
Change range of the height variable to 0.75-1.75m |
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Thu May 11 15:57:08 2023, Ryan Debolt, Byran Reynolds, AREA Updates
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Here is some backlogged information as well as recent updates to our progress on AREA and its optimizations:
4/13/2023
We concluded our initial test of the AREA optimization loop. While analyzing our results, we noticed that most of our runs never reached our |
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Wed May 10 17:43:20 2023, Alex M, How to run the loop
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In this post, I'm going to give step by step instructions on everything you need to do to run the loop. See Julie's
thesis for the most recent iteration of this manual. Also refer to entry 123 for a list of some errors we have encountered historically in the loop and
how to resolve them, though some fixes may be outdated. |
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Tue May 9 18:09:35 2023, Alex M, 05/08/23 Pueo Run
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Here are the run details for the latest PUEO run we've started. There are still some bugs that need to be worked out, which are detailed on the github.
Here is the directory where the data is stored: /fs/ess/PAS1960/HornEvolutionOSC/GENETIS_PUEO/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Run_Outputs/2023_05_08
This run uses 50 individuals per generation with 400k neutrinos per individual at an energy exponent of 19. Only the inner side length and outer |
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Mon May 1 05:45:02 2023, Alex M, Midscale PUEO Run
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I've started a run of the PUEO loop to get some data for evolving the antenna width and height. We are running with 24 individuals, each with 400k
neutrinos at an energy exponent of 19. Here is the output directory: /fs/ess/PAS1960/HornEvolutionOSC/GENETIS_PUEO/BiconeEvolution/current_antenna_evo_build/XF_Loop/Evolutionary_Loop/Run_Outputs/2023_05_01_Test_5
It's very important to note that the cross-pol data being used still comes from the data already stored in pueosim. This is because our extremely |
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Sun Apr 30 03:45:07 2023, Alex M, Preliminary PUEO Run
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We have the PUEO loop in working order, though there are a few errors in accuracy and efficiency. We started a preliminary run with few individuals and
neutrrinos as a large scale test that may still give us some useful data.
For this run, we are only evolving the inner side length (10cm to 25 cm) and height (10 cm to 50 cm). The walls are slanted at 45 degrees, so |
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Thu Apr 27 01:36:32 2023, Alex M, Results from paper symmetric run
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The reviewer asked us to run the loop again but for just symmetric antenna designs. We have completed that run and have results ready. We still need
to resimulate the top five individuals, which I'll update this post with later. I attached the violin plot (though it should be fixed to not let the
legend overlap the data). See this previous entry for the details of the run: http://radiorm.physics.ohio-state.edu/elog/GENETIS/198 |
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Mon Apr 24 13:09:36 2023, Dylan Wells, PUEO Plots Status 7x
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Plots we want to have for PUEO:
FScorePlot2D
Fitness_Scores_RG |
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Tue Apr 11 00:36:49 2023, Bryan Reynolds, AREA physics of results plot first look
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After some work, I've gotten the physics of results plotting script provided by Dennis working to compare the ARASim outputs from an AREA run to
a set of reference data for the ARA bicone (provided by Alex). Among the outputs is a histogram of of events triggered vs cos(theta_nu) (attached here).
This is the plot that was previously presented in GENETIS talks in the physics of results discussion. |
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Wed Apr 5 17:21:07 2023, Nick King, H-pol XF Design
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Work in progress. Update on H-pol XF design. The first plot is the gain pattern with ferrite rod sets (blue) vs. with nothing but the copper plates.
The second plot is the gain pattern with everything but the ferrite rod sets vs. with nothing but the copper plates.
The ferrite rod sets function to narrow the gain pattern. |
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Tue Apr 4 13:51:56 2023, Alex M, Final To Do List for PUEO Loop
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At the main GENETIS meeting yesterday, we collected the last few things that need to be worked out in order to get the PUEO loop in working order. Here's
a list
Skeletonize the xmacros (Alex) 04/10/23 In progress |
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Wed Mar 29 18:36:29 2023, Alex M, GENETIS Working Meeting Update
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This is an entry for the usual Wednesday working meeting GENETIS holds. We are largely carrying on from last week's hackathon hammering out the remaining
pieces that need to be fixed. See the previous ELOG post for a list of those.
Alex |
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Mon Mar 27 13:10:02 2023, Alex M, GENETIS Hackathon Summary and Next Steps
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This entry will serve to summarize what tasks we've completed and still need to complete after last week's GENETIS hackathon.
Alex
My focus was on the XF scripting for making the PUEO antenna. Before last week, we had a script which made the geometry of a PUEO-like antenna. |
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Tue Mar 21 17:58:21 2023, Alex M, GENETIS Hackathon Day 2
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Today was day two of the GENETIS hackathon. See the previous entry for details on day one.
Alex |
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Mon Mar 20 17:32:42 2023, Alex M, GENETIS Hackathon Day 1
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Today was the first day of the GENETIS Hackathon. We are spending several days this week specifically tackling the PUEO project to get it into full form
(or close to it). Here is a progress update after day 1.
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Mon Mar 20 16:31:09 2023, Alex M, Installing PUEOsim
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Will sent me some info on how to install PUEOsim. I attached a markdown file he sent for how to install PUEOsim. He also sent the path to pre-compiled
installation of PUEOsim. Here's the path to the pre-compiled installation: /users/PAS0654/wluszczak/PUEO_shared
Here is his full message, which details that you must also run set_env.sh before running PUEOsim: |