 Fri Feb 22 17:09:28 2019, Suren Gourapura, Updates that need to be added to the manual
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We are redesigning the way we simulate antennas in our loop. To do this, we changed our simulationPEC macro skeletons and our output skeleton.
To make this easier, we changed the way we name the files, from i.uan where i is the simulation number, to i_j.uan where i is the antenna and
j is the frequency. |
Thu Dec 5 16:58:55 2019, Julie Rolla, Updated To-Do List: 
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Updated To-Do List:
Add ARA constants in plotting code: ie
add Veff, theta, R for ARA. This will sit as a constant line for us to compare each evolving parameter to. For example, in the plot Veff vs Generation, |
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Fri Feb 22 15:46:33 2019, Julie Rolla, Updated To-Do List
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We are getting to the stage where we would like to verify each step. It has been requested by Amy that we verify them visually. Here are the plots we
need to make.
Add plotting for L & R parameters (note that we already have similar software to this from the dipole check. You can find this in |
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Fri Aug 5 09:59:07 2022, Dennis Calderon, Updated Effective Volumes and Errors (Paper Run and Curved Sides)
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Update to previous ELOG post for Effective Volumes and Errors for AraSim simulations for antennas from Paper_Run and Curved_Sides.
AraSim version compiled ~11/2021 and the (old) GENETIS version
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Mon Oct 5 17:34:32 2020, Leo Deer, Update Monday 10/5/2020
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Name
Update
Plans for Monday
Alex
M
Alex P
Finish up mutation function and then make sure it functions |
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Fri Oct 2 17:11:25 2020, Ethan Fahimi, Update Friday 10/2/2020
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Name
Update
Plans for Monday
Alex
M
Alex P
Eliot
Leo
Today |
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Wed Sep 9 17:28:54 2020, Alex M, Update 9/9/20
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Name
Update
Plans for tomorrow
Alex
M
I've been working on readying the loop for the transition to slurm. OSC is switching from its current job managing software
(torque/moab) to slurm, which uses some different commands but is functionally similar. Since we have places where jobs are called in the script, I've |
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Tue Jan 26 17:17:41 2021, Ethan Fahimi, Tuesday Updates 01/26/2021
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Ethan F
Continued implementing some solutions the OSC helpdesk
gave me for fixing the unwanted extensions on the job output files.
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Mon May 22 20:34:59 2023, Amy, Things to do before starting new PUEO run from 5/22/23 meeting
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Here is a list of things we agreed to do before starting a new PUEO run. Feel free to add notes here as things are done and we will revisit the
list next week.
Change range of the height variable to 0.75-1.75m |
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Mon Jul 24 15:51:28 2023, Ryan Debolt, Test Loop runs that need done.
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Types of runs I need (May need
some other people to help me run these): |
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Mon Oct 7 15:35:01 2024, Dylan Wells, Template Run Results Slide Deck
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Copy this slide deck to use when presenting on run updates!
https://docs.google.com/presentation/d/1Tk-B1QbFTP_5pQZovfn0_wbTswZTmOrJURpi374xJWo/edit?usp=sharing |
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Wed Nov 20 15:05:14 2019, Julie Rolla, Task update 11/20/19
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Today I spent some time looking at task 1 from the update here: http://radiorm.physics.ohio-state.edu/elog/GENETIS/20.
Below are my updates.
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Mon Jun 24 13:49:49 2019, Julie Rolla, Summer update
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Right now the following people are working on this project:
Julie Rolla, Cade Sbrocco, Scott Janse, Alex Patton, Eliot Ferstl, Abassi Brown, Evelyn Shank, Sophie Dunlap
Today we met for our first working meeting. Scott, Alex, and Eliot were asked to speed up and optimize AraSim. Sophie and Evelyn are working |
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Thu Jul 6 13:12:04 2023, Jack Tillman, Straightened Sides AraSim Results
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After discretizing and straightening the sides of the curved antenna that performed the best (Generation 13, individual 84) and running the antenna through
AraSim, the following results and physics plots were generated. |
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Mon Jul 1 13:45:49 2019, Alex Patton, Status on optimizing AraSim
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We ran valgrind (a profiler) on AraSim to find out where it was spending most of its time, we ran it with callgrind to give an output file of the time and
opened that file with qcashegrind to display it in a legible format. This let us know that the function Param_RE_Tterm_approx was taking up about
75% of the time because it was being called hundreds of millions of times. Now more specifically the standard math functions pow() and exp() were being |
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Thu Mar 11 15:41:52 2021, Alex M, Running The Loop Updated
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Because of issues we were having with XF when running at the command line, we've shifted to running through a Pitzer VDI (see here: https://ondemand.osc.edu/pun/sys/dashboard/batch_connect/sys/bc_desktop/vdi/session_contexts/new).
The VDI will give you a mirror of a desktop running on OSC's side, so things like XF will run much faster. You can open a terminal by clicking
the black box at the bottom of the screen and then run the loop like normal (./Asym_XF_Loop.sh). This has the added benefit of making it possible to exit |
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Fri Feb 4 16:10:32 2022, Julie Rolla, Run Log Template
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For PAEA Algorithm:
Part I: Complete as soon as the run starts
Run details: Please answer all
of the questions below!
Run Type
Answer here whether or not it's AREA (Gain pattern evolution) or PAEA (Bicone
evolution)
Run Date
Add answer here
Run Name
Add answer here
Parameters |
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Tue Jun 21 12:02:23 2022, Alex M, Run Details: Machtay_20201023_300K_Nus_50_Individuals
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This run was started on 10/23/2020. The purpose was to attempt to demonstrate evolution by beginning from 50 identical individuals in the initial
generation (which had previously produced a low score).
This run was the first time we removed the penalty on fitness scores for antennas which exceeded the borehole radius. It was also the first time |
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Tue Jun 28 11:40:32 2022, Alex M, Run Details: Machtay_20200911_Symmetric
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This was a symmetric run that began on 9/11/2020. This run used fewer neutrinos to determine how significant the number would be on the performance of
the evolution. 30,000 neutrinos were used per individual.
10 individuals were evolved over 35 generations, using 100% roulette selection and the old mutation algorithm, where genes had a 40% chance of |
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Tue Jun 28 11:35:15 2022, Alex M, Run Details: Machtay_20200831_Asym_Length_and_Angle
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This run was conducted beginning on August 31, 2020.
Both the angle and length were asymmetric for the two cones. It was run with 10 individuals over 42 generations using 150,000 neutrinos. A penalty
was still implemented on bicones exceeding the borehole width. |