Updates and Results Talks and Posters Advice Ideas Important Figures Write-Ups Outreach How-To Funding Opportunities GENETIS
  Place to document instructions for how to do things  ELOG logo
Message ID: 18     Entry time: Tue Dec 12 17:38:36 2017
Author: Brian Clark 
Subject: Data Analysis in R from day w/ Brian Connolly 
Project: Analysis 

On Nov 28 2017, Brian Connolly came and visited and taught us how to do basic data analysis in R.

He in particular showed us how to do a Linear Discriminant Analysis (LDA) and Principal Component Analysis (PCA).

Attached are three of the data files Carl Pfendner prepared for us to analyze (ARA data, including simulation, force triggers, and RF triggers).

Also attached is some R code that shows how to set up the LDA and the PCA and how to plot their result. You are meant to run each line of the code in r by hand (this is not a functioning R script I don't think).

Go here (https://www.r-project.org/) to learn how to download R. You will also probably have to download GGFortify. To do that, open an r session, and type "install.packages('ggfortify')".

Attachment 1: pca_and_lda.R  934 Bytes  | Show | Show all
Attachment 2: data.zip  1.387 MB
ELOG V3.1.5-fc6679b