 Tue Mar 24 15:38:50 2020, Julie Rolla, X11 Forwarding Issue for Windows
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Most of our students
(1)Ubuntu doesn't come with X11 forwarding on its own. So you can install Xlaunch
xeyes -display :0
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Wed Mar 18 15:01:10 2020, Julie Rolla, ONBOARDING: Tutorial Projects, Reading, Setup, etc. for New Students 
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For each new student joining the group, we ask them to onboard by completing each of the following items in the order given:
(1) Go to osc.edu and request an account
https://www.osc.edu/supercomputing/portals/client_portal/self_signup_for_accounts
Fill |
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Tue Mar 17 16:18:29 2020, Julie Rolla, GENETIS Planning Meeting
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Attendance: Julie Rolla, Alex M.
Today Alex and I met to discuss how to move forward given the COVID-19 restrictions. We have resent out a message polling people's schedules
to create online working sessions. Here is what we are planning: |
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Fri Mar 6 15:01:37 2020, Julie Rolla, GENETIS Working Meeting
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Attendance: Julie, Evelyn, Mitchell, Ryan, Alex M.
Since we have been having issues with the lack of availability of GPUs on OSC, we have come up with a new to-do list:
Try to keep running on Pitzer with 1 core instead of 40. Based on first attempts, it is saying this will reduce wait times to ~3 hours |
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Wed Mar 4 01:00:35 2020, Julie Rolla, GENETIS Working Meeting 03/03/2020
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Attendance: Julie, Mitchell, Ryan, Alex P., Leo, Alex M.
Today's Tasks
Mitchell: Worked on Python Project and helped with Ryan's final bash
project questions |
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Sat Feb 29 02:21:16 2020, Julie Rolla, GENETIS Working Meeting
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Attendance: Julie, Mitchell, Ryan, Evelyn, Eliot, Alex M.
Today's Tasks
Julie: Worked on C++ project, and helping others with the Python project; I also
made additions, clarifications, and edits to the Bash project (also updated the solutions and pushed them to gitHub). I still need to do the following: |
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Tue Feb 25 17:10:36 2020, Alex Machtay & Alex Patton, Working Meeting 2/25/20
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Today's Tasks
Mitchell, Evelyn, Eliot,
Ryan: Work through the bash project; Mitchell is done, Ryan and Evelyn are close to being finished.
Leo: Worked on next presentation (not sure when he'll present--either Friday or next Tuesday). |
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Fri Feb 21 16:47:21 2020, Julie Rolla, GENETIS Working Meeting
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Today's Tasks
Julie: I finished the Python assignment. I am making sure my solutions encompass all of the different
ways to solve this, and will then start on the C++ project.
Mitchell, Evelyn, Eliot, Ryan: Work through my bash project. |
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Tue Feb 18 16:20:59 2020, Julie Rolla, GENETIS Working Meeting
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Today's Tasks
Julie: Continue writing Python project!
Mitchell, Evelyn, Eliot (not here on Tuesdays), Ryan: Work through bash project
Leo: continuing gathering information for the "physics of antennas" lecture series! We start this Friday |
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Fri Feb 14 16:44:44 2020, Julie Rolla, GENETIS Working Meeting
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Today's Tasks
Julie: Write Python project! I have officially finished the bash course for the students.
It can be found here: https://docs.google.com/document/d/1nGdPrwfYJOrO6NBT76Wsh6T0hDmGHo2-23oJ1WyeNcs/edit?usp=sharing. Mitchell
is currently trying it out and will give me comments. |
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Wed Feb 12 01:18:22 2020, Julie Rolla, GENETIS Working Meeting
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Today we continued with the to-do lists items previously posted. I marked all the to-do list items that have been completed with green
and a slash. Note that I have also added a new item at the bottom of the to-do list.
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Mon Feb 10 14:20:56 2020, Julie Rolla, GENETIS Working Meeting
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Today's Tasks
Julie: Write bash practice assignment, assist others when they have questions, work on Git lecture.
(Will finish bash assignments early next week) |
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Tue Feb 4 17:17:10 2020, Julie Rolla, GENETIS working meeting
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As of 01/30/2020, the proposal was submitted! The project description and summary are attached below.
Bicone Loop Status Update:
The loop currently runs; however, it does seem
that if AraSim jobs are left to run while the user is away, it doesn't properly write one or more of the flags, and makes the loop get stuck at |
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Thu Jan 9 14:24:25 2020, Julie Rolla, Winter Break Updates and new to-do list (with deadlines)
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The following items from our to-do list have been successfully completed. Below this list, you can find the remaining urgent items for our proposal due
date of 1/28 (items must be completed with plenty of time to spare).
Completed items:
*Note* please check the highlighted item. |
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Thu Dec 5 16:58:55 2019, Julie Rolla, Updated To-Do List:
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Updated To-Do List:
Add ARA constants in plotting code: ie
add Veff, theta, R for ARA. This will sit as a constant line for us to compare each evolving parameter to. For example, in the plot Veff vs Generation, |
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Thu Dec 5 14:32:54 2019, Julie Rolla, Adding Constraints To-Do List
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In my last post, I mentioned (1) our to-do list for adding the ARA hole constraints, and (2) that we've made a mistake upon implementing it. I've
attached detailed steps of that to-do list that I've written, as well as an explanation for the correction that is currently being worked on. Please
see the pdf attached for an explanation of corrections. |
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Tue Dec 3 15:26:42 2019, Julie Rolla, Working session 12/3/19
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Attendance: Julie, Alex M., Alex P., Cade, Scott.
What we have done today: |
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Tue Dec 3 01:26:52 2019, Julie Rolla, Working session 12/2/19
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Attendance: Julie, Alex P., Cade, Alex M., Mitchell, Evelyn (Go team!)
I. Adding Constraints on the in-ice hole size. |
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Mon Dec 2 16:41:35 2019, Julie Rolla, Requesting an interactive job
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Requesting an interactive job:
qsub -I -X -l walltime=1:00:00 -l nodes=1:ppn=40 |
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Sat Nov 30 22:04:30 2019, Julie Rolla, GENETIS Loop Work: Fixing Consol Errors
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GENETIS Loop Work: Fixing Consol Errors By Julie Rolla
1. Python programs are not running: I think either (1)
the user isn't module loading python, or (2) they are loading the wrong version of Python (remember there's a discrepancy for Python2, and Python3). |